yvcT

yvcT
168

similar to hydroxypyruvate reductase

locus
BSU_34680
Molecular weight
36.46 kDa
pI
5.09
Protein length
Gene length
function
unknown
product
unknown
essential
no
ec
1.1.1.215
synonyms
yvcT

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1052 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,562,566 → 3,563,543
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The protein
Catalyzed reaction/ biological activity
D-gluconate + NADP+ --> 2-dehydro-D-gluconate + H+ + NADPH (according to UniProt)
Protein family
D-isomer specific 2-hydroxyacid dehydrogenase family (with [protein|3769B79A180412C0FE98B3FC54BA49750BAFEDF6|yoaD] and [protein|8AD1C7C761FF8B407A973381CA135C264B995CB7|serA], according to UniProt)
Structure
[PDB|5AOV] (from Pyrococcus furiosus, 46% identity) [pubmed|26865263]
[AF|O32264]
Additional information
The gene is annotated in KEGG as gluconate 2-dehydrogenase EC 1.1.1.215. The gene is marked “similar to glycerate dehydrogenase” in MetaCyc and marked as probable EC 1.1.1.215 in Swiss-Prot. No literature/experimental evidence supporting the annotation is available.  [Pubmed|19935659]
Expression and Regulation
Operons
genes
[gene|B0145F4E13F004ECC773E8758B5844669F4C74D7|yvcT]
description
[Pubmed|22383849]
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[gene|B0145F4E13F004ECC773E8758B5844669F4C74D7|yvcT]

2024-03-25 20:47:12

Jstuelk

39

b40b8602c5351d8693555add9ca90143917d28fb

F70576B8DA139E2FE8500B173B242FD975120F8B

Biological materials
Mutant
MGNA-B633 (yvcT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1632 NBRP B. subtilis, Japan]
BKE34680 (Δ[gene|B0145F4E13F004ECC773E8758B5844669F4C74D7|yvcT]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34680 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAAGGCTCCCCCTTTATGGC,  downstream forward: _UP4_TAAATCAAAAATCCGGTCTG
BKK34680 (Δ[gene|B0145F4E13F004ECC773E8758B5844669F4C74D7|yvcT]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34680 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAAGGCTCCCCCTTTATGGC,  downstream forward: _UP4_TAAATCAAAAATCCGGTCTG
References
Research papers
26865263,36815589

B0145F4E13F004ECC773E8758B5844669F4C74D7

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Time of last update: 2024-03-28 18:31:57

Author of last update: Jstuelk