Difference between revisions of "YumC"
| Line 75: | Line 75: | ||
* '''Catalyzed reaction/ biological activity:''' 2 reduced ferredoxin + NADP<sup>+</sup> + H<sup>+</sup> = 2 oxidized ferredoxin + NADPH (according to Swiss-Prot) | * '''Catalyzed reaction/ biological activity:''' 2 reduced ferredoxin + NADP<sup>+</sup> + H<sup>+</sup> = 2 oxidized ferredoxin + NADPH (according to Swiss-Prot) | ||
| − | * '''Protein family:''' ferredoxin--NADP reductase type 2 family (according to Swiss-Prot) | + | * '''Protein family:''' ferredoxin--NADP reductase type 2 family (according to Swiss-Prot)http://www.ncbi.nlm.nih.gov/pubmed |
* '''Paralogous protein(s):''' [[YcgT]] | * '''Paralogous protein(s):''' [[YcgT]] | ||
| Line 86: | Line 86: | ||
* '''Modification:''' | * '''Modification:''' | ||
| + | *** active site Cys85 is S-bacillithiolated by NaOCl stress in B. subtilis and other Bacillus species[http://www.ncbi.nlm.nih.gov/pubmed/22938038 PubMed] | ||
* '''Cofactor(s):''' FAD, NADPH {{PubMed|20878669}} | * '''Cofactor(s):''' FAD, NADPH {{PubMed|20878669}} | ||
| Line 141: | Line 142: | ||
=References= | =References= | ||
| − | <pubmed> 20208166, 20878669, 19162251, 15252706 </pubmed> | + | <pubmed>22938038, 20208166, 20878669, 19162251, 15252706 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:22, 6 September 2012
- Description: ferredoxin-NAD(P)+ oxidoreductase
| Gene name | yumC |
| Synonyms | |
| Essential | yes PubMed |
| Product | ferredoxin-NAD(P)+ oxidoreductase |
| Function | redox reactions that involve ferredoxin |
| Gene expression levels in SubtiExpress: yumC | |
| MW, pI | 36 kDa, 5.573 |
| Gene length, protein length | 996 bp, 332 aa |
| Immediate neighbours | yumB, yuzG |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
electron transport/ other, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU32110
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH (according to Swiss-Prot)
- Protein family: ferredoxin--NADP reductase type 2 family (according to Swiss-Prot)http://www.ncbi.nlm.nih.gov/pubmed
- Paralogous protein(s): YcgT
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- active site Cys85 is S-bacillithiolated by NaOCl stress in B. subtilis and other Bacillus speciesPubMed
- Cofactor(s): FAD, NADPH PubMed
- Effectors of protein activity:
- Interactions: dimeric protein PubMed
- Localization:
Database entries
- UniProt: O05268
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
