yumB

yumB
168

similar to type II NADH dehydrogenase (non proton-pumping)

locus
BSU_32100
Molecular weight
44.77 kDa
pI
6.62
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yumB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1252 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,300,034  3,301,254
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The protein
Protein family
NADH dehydrogenase family (with [protein|5044FDBEC8D81D1978DB431F9222902FCD80DD2D|yutJ] and [protein|56F407D408272F3674612C9CDFE4A922680EC694|ndh], according to UniProt)
[wiki|Cofactors]
FAD (according to UniProt)
Structure
[PDB|4NWZ] (from Caldalkalibacillus thermarum, 62% identity) [pubmed|24444429]
[AF|O05267]
Paralogous protein(s)
[protein|56F407D408272F3674612C9CDFE4A922680EC694|ndh]
Expression and Regulation
Operons
genes
[gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]
description
[Pubmed|22383849]
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[gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]

2024-03-10 09:01:59

Jstuelk

47

3826a148125c2bb1a26262df72a88eb999ba56d7

C29FEB6F415982C8B3BB4540A4E70752714F4485

Biological materials
Mutant
MGNA-B571 (yumB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1570 NBRP B. subtilis, Japan]
BKE32100 ([gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE32100 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCACATCCACCTTCTCTT,  downstream forward: _UP4_TAAAAACCCGCGGAAGCGGG
BKK32100 ([gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK32100 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCACATCCACCTTCTCTT,  downstream forward: _UP4_TAAAAACCCGCGGAAGCGGG
References
17015645,19935659,24444429

9B3E9074975758BCB3D06820E4A35F8C2B78DCEB

Page visits: 2490

Time of last update: 2024-03-28 12:50:19

Author of last update: Melvin.boenninger