Difference between revisions of "YugI"

From SubtiWiki
Jump to: navigation, search
(References)
Line 94: Line 94:
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 16:22, 31 July 2009

  • Description: similar to polyribonucleotide nucleotidyl transferase, general stress protein with a RNA-binding surface

Gene name yugI
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 14 kDa, 5.918
Gene length, protein length 390 bp, 130 aa
Immediate neighbours yuzA, alaT
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YugI context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU31390

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Operon:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Wenyu Yu, Bingke Yu, Jicheng Hu, Wei Xia, Changwen Jin, Bin Xia
1H, 13C, and 15N resonance assignments of a general stress protein GSP13 from Bacillus subtilis.
Biomol NMR Assign: 2008, 2(2);163-5
[PubMed:19636895] [WorldCat.org] [DOI] (I p)

Wenyu Yu, Jicheng Hu, Bingke Yu, Wei Xia, Changwen Jin, Bin Xia
Solution structure of GSP13 from Bacillus subtilis exhibits an S1 domain related to cold shock proteins.
J Biomol NMR: 2009, 43(4);255-9
[PubMed:19152054] [WorldCat.org] [DOI] (I p)

Ulf Gerth, Holger Kock, Ilja Kusters, Stephan Michalik, Robert L Switzer, Michael Hecker
Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis.
J Bacteriol: 2008, 190(1);321-31
[PubMed:17981983] [WorldCat.org] [DOI] (I p)