Difference between revisions of "YtsJ"

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(Basic information/ Evolution)
(Basic information/ Evolution)
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* '''Protein family:'''
 
* '''Protein family:'''
  
* '''Paralogous protein(s):''' ''[[MleA]]''
+
* '''Paralogous protein(s):''' [[MleA]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 18:22, 24 February 2009

  • Description: malic enzyme

Gene name ytsJ
Synonyms
Essential no
Product NAD-dependent malate dehydrogenase
Function malate utilization
MW, pI 43 kDa, 5.046
Gene length, protein length 1230 bp, 410 aa
Immediate neighbours accD, dnaE
Gene sequence (+200bp) Protein sequence
Genetic context
YtsJ context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: malate <--> pyruvate
  • Protein family:
  • Paralogous protein(s): MleA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm protein PubMed

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant: GP612 (spc), available in Stülke lab
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6: 2135-2146. PubMed
  2. Doan, T., P. Servant, S. Tojo, H. Yamaguchi, G. Lerondel, K. Yoshida, Y. Fujita, and S. Aymerich. 2003. The Bacillus subtilis ywkA gene encodes a malic enzyme and its transcription is activated by the YufL/YufM two-component system in response to malate. Microbiology 149: 2331-2343. PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed