Difference between revisions of "YtpB"

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(Expression and regulation)
(Expression and regulation)
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* '''[[Sigma factor]]:'''
 
* '''[[Sigma factor]]:'''
** ''[[ytpA]]'' [[SigM]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18179421 Pubmed]
+
** ''[[ytpA]]'': [[SigM]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18179421 Pubmed]
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 18:57, 17 May 2011

  • Description: salt stress protein

Gene name ytpB
Synonyms
Essential no
Product salt stress protein
Function unknown
MW, pI 42 kDa, 5.755
Gene length, protein length 1101 bp, 367 aa
Immediate neighbours ytqB, ytpA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtpB context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell envelope stress proteins (controlled by SigM, W, X, Y)

This gene is a member of the following regulons

SigM regulon

The gene

Basic information

  • Locus tag: BSU30500

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed under conditions of salt stress (SigM) Pubmed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421] [WorldCat.org] [DOI] (P p)

Alia Lapidus, Nathalie Galleron, Alexei Sorokin, S Dusko Ehrlich
Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region.
Microbiology (Reading): 1997, 143 ( Pt 11);3431-3441
[PubMed:9387221] [WorldCat.org] [DOI] (P p)