Difference between revisions of "YtlA"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 687 bp, 229 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 687 bp, 229 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytmA]]'', ''[[ytlB]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytmA]]'', ''[[ytlC]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15037&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15037&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
Line 87: Line 87:
  
 
=Expression and regulation=
 
=Expression and regulation=
* '''Operon:''' ''[[ytlA]]-[[ytlB]]-[[ytlC]]-[[ytlD]]'' {{PubMed|9387221}}
+
* '''Operon:''' ''[[ytlA]]-[[ytlC]]-[[ytlD]]'' {{PubMed|9387221}}
  
 
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,15383836}}
 
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,15383836}}

Revision as of 20:28, 19 December 2009

  • Description: similar to ABC transporter (binding protein)

Gene name ytlA
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 25 kDa, 5.957
Gene length, protein length 687 bp, 229 aa
Immediate neighbours ytmA, ytlC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtlA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU30595

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References