Difference between revisions of "YtcB"

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(Categories containing this gene/protein)
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
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{{SubtiWiki regulon|[[SigK regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''[[ytcA]]-[[ytcB]]-[[ytcC]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytcB_3157008_3157958_1 ytcB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytcB_3157008_3157958_1 ytcB] {{PubMed|22383849}}
  
* '''Sigma factor:'''
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* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|22383849}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:57, 8 May 2013

  • Description: putative UDP-glucose epimerase

Gene name ytcB
Synonyms
Essential no
Product putative UDP-glucose epimerase
Function unknown
Gene expression levels in SubtiExpress: ytcB
MW, pI 34 kDa, 8.866
Gene length, protein length 948 bp, 316 aa
Immediate neighbours ytcA, ytcC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtcB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtcB expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU30870

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sugar epimerase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References