Difference between revisions of "YtcA"

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(Categories containing this gene/protein)
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
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{{SubtiWiki regulon|[[SigK regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''[[ytcA]]-[[ytcB]]-[[ytcC]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytcA_3155725_3157011_1 ytcA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytcA_3155725_3157011_1 ytcA] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|22383849}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:57, 8 May 2013

  • Description: similar to to NDP-sugar dehydrogenase

Gene name ytcA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ytcA
MW, pI 46 kDa, 5.943
Gene length, protein length 1284 bp, 428 aa
Immediate neighbours ytdA, ytcB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtcA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtcA expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU30860

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References