Difference between revisions of "YtbE"

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(Categories containing this gene/protein)
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* '''Description:''' arabinose reductase <br/><br/>
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* '''Description:''' putative aldo/keto reductase, may be involved in detoxification <br/><br/>
  
 
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{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/17114254 PubMed]  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/17114254 PubMed]  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || arabinose reductase  
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|style="background:#ABCDEF;" align="center"| '''Product''' || putative aldo/keto reductase  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of arabitol
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
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|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU29050 ytbE]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU29050 ytbE]
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[utilization of specific carbon sources]]}},
+
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}},
 
{{SubtiWiki category|[[membrane proteins]]}},
 
{{SubtiWiki category|[[membrane proteins]]}},
 
{{SubtiWiki category|[[essential genes]]}}
 
{{SubtiWiki category|[[essential genes]]}}

Revision as of 17:34, 15 November 2012

  • Description: putative aldo/keto reductase, may be involved in detoxification

Gene name ytbE
Synonyms
Essential yes PubMed
Product putative aldo/keto reductase
Function unknown
Gene expression levels in SubtiExpress: ytbE
MW, pI 31 kDa, 4.786
Gene length, protein length 840 bp, 280 aa
Immediate neighbours ytbD, ytaG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtbE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtbE expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes, membrane proteins, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29050

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Nudix hydrolase, aldo/keto reductase family (according to Swiss-Prot)
  • Paralogous protein(s): YvgN

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jian Lei, Yan-Feng Zhou, Lan-Fen Li, Xiao-Dong Su
Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis.
Protein Sci: 2009, 18(8);1792-800
[PubMed:19585557] [WorldCat.org] [DOI] (I p)

Helena B Thomaides, Ella J Davison, Lisa Burston, Hazel Johnson, David R Brown, Alison C Hunt, Jeffery Errington, Lloyd Czaplewski
Essential bacterial functions encoded by gene pairs.
J Bacteriol: 2007, 189(2);591-602
[PubMed:17114254] [WorldCat.org] [DOI] (P p)