Difference between revisions of "YtbE"

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|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of arabitol
 
|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of arabitol
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU29050 ytbE]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 4.786   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 4.786   

Revision as of 14:48, 7 August 2012

  • Description: arabinose reductase

Gene name ytbE
Synonyms
Essential yes PubMed
Product arabinose reductase
Function utilization of arabitol
Gene expression levels in SubtiExpress: ytbE
MW, pI 31 kDa, 4.786
Gene length, protein length 840 bp, 280 aa
Immediate neighbours ytbD, ytaG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtbE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtbE expression.png
























Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29050

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Nudix hydrolase, aldo/keto reductase family (according to Swiss-Prot)
  • Paralogous protein(s): YvgN

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jian Lei, Yan-Feng Zhou, Lan-Fen Li, Xiao-Dong Su
Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis.
Protein Sci: 2009, 18(8);1792-800
[PubMed:19585557] [WorldCat.org] [DOI] (I p)

Helena B Thomaides, Ella J Davison, Lisa Burston, Hazel Johnson, David R Brown, Alison C Hunt, Jeffery Errington, Lloyd Czaplewski
Essential bacterial functions encoded by gene pairs.
J Bacteriol: 2007, 189(2);591-602
[PubMed:17114254] [WorldCat.org] [DOI] (P p)