Difference between revisions of "YrrB"

From SubtiWiki
Jump to: navigation, search
Line 52: Line 52:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27490&redirect=T BSU27490]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 86: Line 87:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27490&redirect=T BSU27490]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2Q7F 2Q7F] {{PubMed|17624311}}  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2Q7F 2Q7F] {{PubMed|17624311}}  

Revision as of 14:22, 2 April 2014

  • Description: unknown

Gene name yrrB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrrB
MW, pI 22 kDa, 4.328
Gene length, protein length 618 bp, 206 aa
Immediate neighbours recD2, trmU
Sequences Protein DNA DNA_with_flanks
Genetic context
YrrB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrrB expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27490

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: contains a tetratricopeptide repeat (TPR) domain PubMed
  • Modification:
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dohyun Han, Jongkil Oh, Kyunggon Kim, Hyosun Lim, Youngsoo Kim
Crystal structure of YrrB: a TPR protein with an unusual peptide-binding site.
Biochem Biophys Res Commun: 2007, 360(4);784-90
[PubMed:17624311] [WorldCat.org] [DOI] (P p)