Difference between revisions of "YqxH"

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* '''Description:''' holin, skin element <br/><br/>
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* '''Description:''' holin, [[skin element]] <br/><br/>
  
 
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
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* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' secreted (according to Swiss-Prot)
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* '''[[Localization]]:'''
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** secreted (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqxH_2665436_2665858_-1 yqxH] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqxH_2665436_2665858_-1 yqxH] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 20:02, 16 February 2014

Gene name yqxH
Synonyms yqdD
Essential no
Product holin
Function export of the phage murein hydrolases
Gene expression levels in SubtiExpress: yqxH
MW, pI 15 kDa, 8.549
Gene length, protein length 420 bp, 140 aa
Immediate neighbours cwlA, yqxG
Sequences Protein DNA DNA_with_flanks
Genetic context
YqxH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqxH expression.png















Categories containing this gene/protein

Skin element

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU25910

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Cp-1 holin family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References