Difference between revisions of "YqcG"

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* '''Regulation:'''  
 
* '''Regulation:'''  
 
** expressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647 PubMed]
 
** expressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647 PubMed]
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** strongly repressed in response to glucose starvation in M9 medium {{PubMed|23033921}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
'''Additional publications:''' {{PubMed|20817675}}
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'''Additional publications:''' {{PubMed|23033921,20817675}}
 
<pubmed>14651647  22200572 </pubmed>
 
<pubmed>14651647  22200572 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:41, 8 October 2012

  • Description: toxin

Gene name yqcG
Synonyms
Essential no
Product toxin
Function unknown
Gene expression levels in SubtiExpress: yqcG
Interactions involving this protein in SubtInteract: YqcG
MW, pI 59 kDa, 8.813
Gene length, protein length 1593 bp, 531 aa
Immediate neighbours yqzI, yqcF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqcG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqcG expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, Skin element

This gene is a member of the following regulons

AbrB regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU25860

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0720 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
    • strongly repressed in response to glucose starvation in M9 medium PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Laura E Holberger, Fernando Garza-Sánchez, James Lamoureux, David A Low, Christopher S Hayes
A novel family of toxin/antitoxin proteins in Bacillus species.
FEBS Lett: 2012, 586(2);132-6
[PubMed:22200572] [WorldCat.org] [DOI] (I p)

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)