Difference between revisions of "YpkP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yplQ]]'', ''[[dfrA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yplQ]]'', ''[[dfrA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21800 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21800 DNA_with_flanks]
 
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Revision as of 10:31, 14 May 2013

  • Description: unknown

Gene name ypkP
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ypkP
Metabolic function and regulation of this protein in SubtiPathways:
Nucleotides (regulation)
MW, pI 23 kDa, 8.066
Gene length, protein length 618 bp, 206 aa
Immediate neighbours yplQ, dfrA
Sequences Protein DNA DNA_with_flanks
Genetic context
YpkP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpkP expression.png




























Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21800

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: pseudouridine synthase rsuA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ypkP (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References