Difference between revisions of "YosP"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU20040 yosP]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU20040 yosP]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 6.094   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 6.094   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yosR]]'', ''[[yosQ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yosR]]'', ''[[yosQ]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13896&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU20040 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU20040 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU20040 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yosP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yosP_context.gif]]

Revision as of 13:02, 13 May 2013

  • Description: similar to ribonucleoside-diphosphate reductase (beta subunit)

Gene name yosP
Synonyms nrdF
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yosP
MW, pI 22 kDa, 6.094
Gene length, protein length 1795 bp, 329 aa
Immediate neighbours yosR, yosQ
Sequences Protein DNA Advanced_DNA
Genetic context
YosP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YosP expression.png















Categories containing this gene/protein

SP-beta prophage, poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU20040

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): NrdF

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Slavisa Stankovic, Blazenka Soldo, Tanja Beric-Bjedov, Jelena Knezevic-Vukcevic, Draga Simic, Vladimir Lazarevic
Subspecies-specific distribution of intervening sequences in the Bacillus subtilis prophage ribonucleotide reductase genes.
Syst Appl Microbiol: 2007, 30(1);8-15
[PubMed:16621400] [WorldCat.org] [DOI] (P p)

V Lazarevic
Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.
Nucleic Acids Res: 2001, 29(15);3212-8
[PubMed:11470879] [WorldCat.org] [DOI] (I p)

V Lazarevic, B Soldo, A Düsterhöft, H Hilbert, C Mauël, D Karamata
Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPbeta.
Proc Natl Acad Sci U S A: 1998, 95(4);1692-7
[PubMed:9465078] [WorldCat.org] [DOI] (P p)