yorK

yorK
168

single-strand DNA-specific exonuclease

locus
BSU_20350
Molecular weight
65.60 kDa
pI
6.56
Protein length
Gene length
function
unknown
product
single-strand DNA-specific exonuclease
essential
no
synonyms
yorK

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0608 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,179,526 → 2,181,256
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The protein
Protein family
RecJ family (with [protein|BA755FA1CB1E0C006E9A23489A7C8997141AA498|recJ], according to UniProt)
[wiki|Domains]
[wiki|DHH-DHHA1 domain]
Structure
[PDB|5F54] (from Deinococcus radiodurans, the [wiki|DHH-DHHA1 domain], 23% identity) [pubmed|27058167]
[AF|O31903]
Modification
phosphorylation on Tyr-473 [Pubmed|17218307]
Paralogous protein(s)
[protein|BA755FA1CB1E0C006E9A23489A7C8997141AA498|recJ]
Biological materials
Mutant
BKE20350 (Δ[gene|CDFA18E1C0445302ED4D8F93F88822EC6BD646BB|yorK]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE20350 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GTCGCCAATTAGTCTATACT,  downstream forward: _UP4_CTTGTGTTTTAAGGGGGAGA
BKK20350 (Δ[gene|CDFA18E1C0445302ED4D8F93F88822EC6BD646BB|yorK]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK20350 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GTCGCCAATTAGTCTATACT,  downstream forward: _UP4_CTTGTGTTTTAAGGGGGAGA
References
17218307,10498723,27058167

CDFA18E1C0445302ED4D8F93F88822EC6BD646BB

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Time of last update: 2024-03-27 20:37:26

Author of last update: Melvin.boenninger