Difference between revisions of "YokJ"

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|style="background:#ABCDEF;" align="center"|'''Function''' || inhibition of the cytotoxic activity of [[YokI]]
 
|style="background:#ABCDEF;" align="center"|'''Function''' || inhibition of the cytotoxic activity of [[YokI]]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU21570 yokJ]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YokJ YokJ]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YokJ YokJ]

Revision as of 10:49, 7 August 2012

  • Description: putative antitoxin

Gene name yokJ
Synonyms
Essential no
Product putative antitoxin
Function inhibition of the cytotoxic activity of YokI
Gene expression levels in SubtiExpress: yokJ
Interactions involving this protein in SubtInteract: YokJ
MW, pI 18 kDa, 4.134
Gene length, protein length 495 bp, 165 aa
Immediate neighbours yokK, yokI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YokJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YokJ expression.png

























Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, SP-beta prophage

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU21570

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Laura E Holberger, Fernando Garza-Sánchez, James Lamoureux, David A Low, Christopher S Hayes
A novel family of toxin/antitoxin proteins in Bacillus species.
FEBS Lett: 2012, 586(2);132-6
[PubMed:22200572] [WorldCat.org] [DOI] (I p)