Difference between revisions of "YojM"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU19400 yojM]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 20 kDa, 5.636   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 20 kDa, 5.636   

Revision as of 10:30, 7 August 2012

  • Description: superoxide dismutase

Gene name yojM
Synonyms
Essential no
Product superoxide dismutase
Function unknown
Gene expression levels in SubtiExpress: yojM
MW, pI 20 kDa, 5.636
Gene length, protein length 588 bp, 196 aa
Immediate neighbours yojN, cwlS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YojM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YojM expression.png
























Categories containing this gene/protein

resistance against oxidative and electrophile stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU19400

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: alpha-ketoglutarate dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): zinc
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lucia Banci, Ivano Bertini, Vito Calderone, Fiorenza Cramaro, Rebecca Del Conte, Adele Fantoni, Stefano Mangani, Alessandro Quattrone, Maria Silvia Viezzoli
A prokaryotic superoxide dismutase paralog lacking two Cu ligands: from largely unstructured in solution to ordered in the crystal.
Proc Natl Acad Sci U S A: 2005, 102(21);7541-6
[PubMed:15897454] [WorldCat.org] [DOI] (P p)