Difference between revisions of "YocR"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU19340 yocR]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 9.592   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 9.592   

Revision as of 10:29, 7 August 2012

  • Description: similar to sodium-dependent transporter

Gene name yocR
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yocR
MW, pI 48 kDa, 9.592
Gene length, protein length 1335 bp, 445 aa
Immediate neighbours sodF, yocS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YocR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YocR expression.png
























Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU19340

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: iron/manganese superoxide dismutase family (according to Swiss-Prot)
  • Paralogous protein(s): YhdH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane associated PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)