Difference between revisions of "YngF"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yngJ]]-[[yngI]]-[[yngH]]-[[yngG]]-[[yngF]]-[[yngE]]'' {{PubMed|12662922}}
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* '''Operon:''' ''[[yngJ]]-[[yngI]]-[[yngH]]-[[yngHB]]-[[yngG]]-[[yngF]]-[[yngE]]'' {{PubMed|12662922}}
  
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}}
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}}
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 18:23, 10 February 2012

  • Description: methylglutaconyl-CoA hydratase

Gene name yngF
Synonyms
Essential no
Product methylglutaconyl-CoA hydratase
Function mother cell metabolism, leucine utilization
MW, pI 27 kDa, 7.671
Gene length, protein length 780 bp, 260 aa
Immediate neighbours yngE, yngG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YngF context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

utilization of amino acids, sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU18220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 3-methylglutaconyl-CoA --->(S)-3-hydroxy-3-methylglutaryl-CoA PubMed
  • Protein family: enoyl-CoA hydratase/isomerase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 3KQF (from B. anthracis)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References