Difference between revisions of "YmaB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nrdF]]'', ''[[cwlC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nrdF]]'', ''[[cwlC]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17400 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17400 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ymaB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ymaB_context.gif]]

Revision as of 10:19, 14 May 2013

  • Description: unknown


Gene name ymaB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ymaB
Metabolic function and regulation of this protein in SubtiPathways:
Nucleotides (regulation)
MW, pI 23 kDa, 4.514
Gene length, protein length 618 bp, 206 aa
Immediate neighbours nrdF, cwlC
Sequences Protein DNA DNA_with_flanks
Genetic context
YmaB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YmaB expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

ResD regulon

The gene

Basic information

  • Locus tag: BSU17400

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed under anaerobic conditions (ResD) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Elisabeth Härtig, Anja Hartmann, Manuela Schätzle, Alessandra M Albertini, Dieter Jahn
The Bacillus subtilis nrdEF genes, encoding a class Ib ribonucleotide reductase, are essential for aerobic and anaerobic growth.
Appl Environ Microbiol: 2006, 72(8);5260-5
[PubMed:16885274] [WorldCat.org] [DOI] (P p)

C Scotti, A Valbuzzi, M Perego, A Galizzi, A M Albertini
The Bacillus subtilis genes for ribonucleotide reductase are similar to the genes for the second class I NrdE/NrdF enzymes of Enterobacteriaceae.
Microbiology (Reading): 1996, 142 ( Pt 11);2995-3004
[PubMed:8969495] [WorldCat.org] [DOI] (P p)