Difference between revisions of "YlzJ"
| Line 1: | Line 1: | ||
| − | * '''Description:''' | + | * '''Description:''' [[germination]] protein, required for [[TepA]] activity <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || - | |style="background:#ABCDEF;" align="center"| '''Essential''' || - | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || [[germination]] protein |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[TepA]] activity |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8.0 kDa, 4.905 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8.0 kDa, 4.905 | ||
| Line 32: | Line 32: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[proteolysis]]}}, |
| + | {{SubtiWiki category|[[germination]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | {{SubtiWiki regulon|[[SigG regulon]]}} | + | {{SubtiWiki regulon|[[SigG regulon]]}}, |
| + | {{SubtiWiki regulon|[[SpoVT regulon]]}}, | ||
| + | |||
=The gene= | =The gene= | ||
| Line 60: | Line 63: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| + | ** the protein is required to allow [[TepA]] proteolytic activity otwards SASPs {{PubMed|23927687}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 100: | Line 104: | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** expressed late during [[sporulation]] in the forespore ([[SigG]]) {{PubMed|23123912}} | + | ** expressed late during [[sporulation]] in the forespore ([[SigG]], [[SpoVT]]) {{PubMed|23123912}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[SpoVT]]: transcription repression {{PubMed|23123912}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 125: | Line 130: | ||
=References= | =References= | ||
| − | <pubmed>22383849</pubmed> | + | <pubmed>22383849 23927687</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:32, 12 August 2013
- Description: germination protein, required for TepA activity
| Gene name | ylzJ |
| Synonyms | |
| Essential | - |
| Product | germination protein |
| Function | control of TepA activity |
| MW, pI | 8.0 kDa, 4.905 |
| Gene length, protein length | 210 bp, 70 aa |
| Immediate neighbours | tepA, spoIIIE |
| Gene sequence (+200bp) | Protein sequence |
| Genetic context File:YlzJ context.gif | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16799
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: C0H413
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- expressed late during sporulation in the forespore (SigG, SpoVT) PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Bjorn A Traag, Antonia Pugliese, Barbara Setlow, Peter Setlow, Richard Losick
A conserved ClpP-like protease involved in spore outgrowth in Bacillus subtilis.
Mol Microbiol: 2013, 90(1);160-6
[PubMed:23927687]
[WorldCat.org]
[DOI]
(I p)
Pierre Nicolas, Ulrike Mäder, Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, Mark Hoebeke, Stéphane Aymerich, Dörte Becher, Paola Bisicchia, Eric Botella, Olivier Delumeau, Geoff Doherty, Emma L Denham, Mark J Fogg, Vincent Fromion, Anne Goelzer, Annette Hansen, Elisabeth Härtig, Colin R Harwood, Georg Homuth, Hanne Jarmer, Matthieu Jules, Edda Klipp, Ludovic Le Chat, François Lecointe, Peter Lewis, Wolfram Liebermeister, Anika March, Ruben A T Mars, Priyanka Nannapaneni, David Noone, Susanne Pohl, Bernd Rinn, Frank Rügheimer, Praveen K Sappa, Franck Samson, Marc Schaffer, Benno Schwikowski, Leif Steil, Jörg Stülke, Thomas Wiegert, Kevin M Devine, Anthony J Wilkinson, Jan Maarten van Dijl, Michael Hecker, Uwe Völker, Philippe Bessières, Philippe Noirot
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.
Science: 2012, 335(6072);1103-6
[PubMed:22383849]
[WorldCat.org]
[DOI]
(I p)
