Difference between revisions of "YlyB"

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(Database entries)
Line 78: Line 78:
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2I82 2I82] (the ''E. coli'' enzyme) {{PubMed|17188032}}
  
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q45480 Q45480]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q45480 Q45480]

Revision as of 20:33, 9 July 2009

  • Description: similar to pseudouridylate synthase

Gene name ylyB
Synonyms ylmL
Essential no
Product unknown
Function unknown
MW, pI 33 kDa, 5.431
Gene length, protein length 909 bp, 303 aa
Immediate neighbours lspA, pyrR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlyB context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Locus tag: BSU15460

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: RNA uridine = RNA pseudouridine (according to Swiss-Prot)
  • Protein family: S4 RNA-binding domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References