Difference between revisions of "YloH"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yloH_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rpoZ_1642567_1642770_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yloH_expression.png|500px]]
 
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Revision as of 09:17, 19 April 2012

Gene name yloH
Synonyms
Essential no
Product omega subunit of RNA polymerase
Function unknown
Interactions involving this protein in SubtInteract: YloH
Metabolic function and regulation of this protein in SubtiPathways:
Nucleotides (regulation)
MW, pI 7 kDa, 5.513
Gene length, protein length 201 bp, 67 aa
Immediate neighbours gmk, yloI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YloH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YloH expression.png




























Categories containing this gene/protein

transcription

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU15690

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1) (according to Swiss-Prot)
  • Protein family: RNA polymerase subunit omega family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:closely associated with RNA polymerase involved in transcribing both mRNA and rRNA operons PubMed

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

L Minakhin, S Bhagat, A Brunning, E A Campbell, S A Darst, R H Ebright, K Severinov
Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly.
Proc Natl Acad Sci U S A: 2001, 98(3);892-7
[PubMed:11158566] [WorldCat.org] [DOI] (P p)