YlmE

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  • Description: amino acid racemase, production of D-amino acids, control of biofilm formation

Gene name ylmE
Synonyms
Essential no
Product amino acid racemase
Function control of biofilm formation
Gene expression levels in SubtiExpress: ylmE
MW, pI 25 kDa, 5.546
Gene length, protein length 690 bp, 230 aa
Immediate neighbours ylmD, sepF
Sequences Protein DNA DNA_with_flanks
Genetic context
YlmE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlmE expression.png
























Categories containing this gene/protein

biofilm formation

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU15380

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0001 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References