Difference between revisions of "YlmC"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylmB]]'', ''[[ylmD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylmB]]'', ''[[ylmD]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15360 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15360 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ylmC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ylmC_context.gif]]

Revision as of 10:10, 14 May 2013

Gene name ylmC
Synonyms
Essential no
Product sporulation protein
Function unknown
Gene expression levels in SubtiExpress: ylmC
MW, pI 8 kDa, 5.635
Gene length, protein length 243 bp, 81 aa
Immediate neighbours ylmB, ylmD
Sequences Protein DNA DNA_with_flanks
Genetic context
YlmC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlmC expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU15360

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YmxH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ana B Abecasis, Mónica Serrano, Renato Alves, Leonor Quintais, José B Pereira-Leal, Adriano O Henriques
A genomic signature and the identification of new sporulation genes.
J Bacteriol: 2013, 195(9);2101-15
[PubMed:23396918] [WorldCat.org] [DOI] (I p)

Bjorn A Traag, Antonia Pugliese, Jonathan A Eisen, Richard Losick
Gene conservation among endospore-forming bacteria reveals additional sporulation genes in Bacillus subtilis.
J Bacteriol: 2013, 195(2);253-60
[PubMed:23123912] [WorldCat.org] [DOI] (I p)