Difference between revisions of "YlaK"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylaJ]]'', ''[[ylaL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylaJ]]'', ''[[ylaL]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14810 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14810 DNA_with_flanks]
 
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|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ylaK_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ylaK_context.gif]]

Revision as of 10:07, 14 May 2013

  • Description: similar to phosphate starvation inducible protein PhoH

Gene name ylaK
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ylaK
MW, pI 49 kDa, 5.422
Gene length, protein length 1326 bp, 442 aa
Immediate neighbours ylaJ, ylaL
Sequences Protein DNA DNA_with_flanks
Genetic context
YlaK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlaK expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU14810

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): PhoH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation: repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexei E Kazakov, Olga Vassieva, Mikhail S Gelfand, Andrei Osterman, Ross Overbeek
Bioinformatics classification and functional analysis of PhoH homologs.
In Silico Biol: 2003, 3(1-2);3-15
[PubMed:12762842] [WorldCat.org] (P p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)