Difference between revisions of "YkuQ"

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(Extended information on the protein)
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dapH_1488973_1489683_1 ykuQ] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dapH_1488973_1489683_1 ykuQ] {{PubMed|22383849}}
  
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Revision as of 19:53, 3 November 2012

  • Description: similar to tetrahydrodipicolinate succinylase

Gene name ykuQ
Synonyms
Essential yes PubMed
Product similar to tetrahydrodipicolinate succinylase
Function biosynthesis of lysine and peptidoglycan
Gene expression levels in SubtiExpress: ykuQ
Metabolic function and regulation of this protein in SubtiPathways:
Lys, Thr
MW, pI 24 kDa, 4.678
Gene length, protein length 708 bp, 236 aa
Immediate neighbours ykuP, ykuR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkuQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkuQ expression.png















Categories containing this gene/protein

cell wall synthesis, biosynthesis of cell wall components, essential genes, biosynthesis/ acquisition of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU14180

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Acetyl-CoA + (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + L-2-acetamido-6-oxoheptanedioate (according to Swiss-Prot)
  • Protein family: transferase hexapeptide repeat family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3R8Y (from Bacillus anthracis, 80% identity, 96% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References