Difference between revisions of "YkuQ"

From SubtiWiki
Jump to: navigation, search
Line 54: Line 54:
  
  
 +
 +
= Categories containing this gene/protein =
 +
{{SubtiWiki category|[[essential genes]]}},
 +
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}}
 
=The protein=
 
=The protein=
  

Revision as of 22:13, 30 November 2010

  • Description: similar to tetrahydrodipicolinate succinylase

Gene name ykuQ
Synonyms
Essential yes PubMed
Product similar to tetrahydrodipicolinate succinylase
Function biosynthesis of lysine and peptidoglycan
Metabolic function and regulation of this protein in SubtiPathways:
Lys, Thr
MW, pI 24 kDa, 4.678
Gene length, protein length 708 bp, 236 aa
Immediate neighbours ykuP, ykuR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkuQ context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU14180

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

Categories containing this gene/protein

essential genes, poorly characterized/ putative enzymes

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Acetyl-CoA + (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + L-2-acetamido-6-oxoheptanedioate (according to Swiss-Prot)
  • Protein family: transferase hexapeptide repeat family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References