ykuP

168

flavodoxin, binds FMN, replaces ferredoxin under conditions of iron limitation

locus: BSU_14170

Molecular weight: 20.11 kDa

pI: 4.1

Protein length: 151 aa

Gene length: 456 bp

function: electron transfer

product: flavodoxin

essential: no

synonyms: ykuP

List of homologs in different organisms, belongs to COG0716 (Galperin et al., 2021)

Gene

Coordinates: 1,488,413 → 1,488,868

Advertisement

The protein

Protein family

• flavodoxin family (with [protein|0932DDC285635C02067A3302CEDA302FE4269179|ykuN], according to UniProt)

[wiki|Domains]

• [wiki|Flavodoxin-like domain] (aa 4-144) (according to UniProt)

[wiki|Cofactors]

• FMN

Structure

• [PDB|6FSG] (from B. cereus, 46% identity) [pubmed|29722453]
• [AF|O34589]

Paralogous protein(s)

• [protein|0932DDC285635C02067A3302CEDA302FE4269179|ykuN]

Biological materials

Mutant

• MGNA-B339 (ykuP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1338 NBRP B. subtilis, Japan]
• BKE14170 (Δ[gene|ECAFD2873ADE6B65C7B3C27FF26E0FAAA74839CC|ykuP]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE14170 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTCCTTGTTCCTCCTCT,  downstream forward: _UP4_TGATCACTCACTGGGAACTG
• BKK14170 (Δ[gene|ECAFD2873ADE6B65C7B3C27FF26E0FAAA74839CC|ykuP]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK14170 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTCCTTGTTCCTCCTCT,  downstream forward: _UP4_TGATCACTCACTGGGAACTG

References

• 15449930,17127770,12354229,12107147,20186410,24214949,21665975,29133393,29914988,29722453