Difference between revisions of "YkfB"

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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU12980
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
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* '''Swiss prot entry:'''
 
* '''Swiss prot entry:'''
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU12980 BSU12980]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU12980]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 12:42, 3 June 2009

  • Description: L-Ala-D/L-Glu epimerase

Gene name ykfB
Synonyms
Essential no
Product L-Ala-D/L-Glu epimerase
Function cell wall metabolism
MW, pI 39 kDa, 5.905
Gene length, protein length 1098 bp, 366 aa
Immediate neighbours ykfA, ykfC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkfB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU12980

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1TKK (complex with substrate), 1JPM
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism: CodY: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed