Difference between revisions of "YjdF"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[manP]]-[[manA]]-[[yjdF]]'' {{PubMed|20139185}}
 
* '''Operon:''' ''[[manP]]-[[manA]]-[[yjdF]]'' {{PubMed|20139185}}
  
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|20139185}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yjdF_1275809_1276291_1 yjdF] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigA]] {{PubMed|20139185}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 18:06, 12 April 2012

  • Description: unknown

Gene name yjdF
Synonyms
Essential no
Product unknown
Function unknown
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 18 kDa, 10.557
Gene length, protein length 480 bp, 160 aa
Immediate neighbours manA, yjdG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjdF context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

ManR regulon

The gene

Basic information

  • Locus tag: BSU12030

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
    • ManR: transcription activation in the presence of mannose and absence of glucose PubMed
    • expession may be controlled by a potential RNA switch located in the 5' untranslated region of the manP-manA-yjdF mRNA between manA and yjdF PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References