Difference between revisions of "YjcN"

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(Extended information on the protein)
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 318 bp, 106 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 318 bp, 106 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcM]]'', ''[[yjcO]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcM]]'', ''[[yjzF]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13049&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13049&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 09:24, 30 November 2012

  • Description: unknown

Gene name yjcN
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yjcN
MW, pI 11 kDa, 8.387
Gene length, protein length 318 bp, 106 aa
Immediate neighbours yjcM, yjzF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjcN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YjcN expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

Rok regulon

The gene

Basic information

  • Locus tag: BSU11920

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yjcN (according to DBTBS)
  • Sigma factor:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mark Albano, Wiep Klaas Smits, Linh T Y Ho, Barbara Kraigher, Ines Mandic-Mulec, Oscar P Kuipers, David Dubnau
The Rok protein of Bacillus subtilis represses genes for cell surface and extracellular functions.
J Bacteriol: 2005, 187(6);2010-9
[PubMed:15743949] [WorldCat.org] [DOI] (P p)