Difference between revisions of "YjbO"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yjbO_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yjbO_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yjbO_1238523_1239374_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yjbO_expression.png|500px]]
 
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Revision as of 17:36, 18 April 2012

  • Description: unknown

Gene name yjbO
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 31 kDa, 6.551
Gene length, protein length 849 bp, 283 aa
Immediate neighbours nadF, prpE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjbO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YjbO expression.png
























Categories containing this gene/protein

translation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU11620

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: RNA uridine = RNA pseudouridine (according to Swiss-Prot)
  • Protein family: pseudouridine synthase rluA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: expressed during exponential growth
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hideaki Nanamiya, Koji Kasai, Akira Nozawa, Choong-Soo Yun, Takakuni Narisawa, Kana Murakami, Yousuke Natori, Fujio Kawamura, Yuzuru Tozawa
Identification and functional analysis of novel (p)ppGpp synthetase genes in Bacillus subtilis.
Mol Microbiol: 2008, 67(2);291-304
[PubMed:18067544] [WorldCat.org] [DOI] (P p)