Difference between revisions of "YitH"

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(Extended information on the protein)
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10990 yitH]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU10990 yitH]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 5.815   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 5.815   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitG]]'', ''[[yitI]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitG]]'', ''[[yitI]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12939&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10990 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yitH_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yitH_context.gif]]

Revision as of 12:31, 13 May 2013

  • Description: unknown

Gene name yitH
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yitH
MW, pI 30 kDa, 5.815
Gene length, protein length 846 bp, 282 aa
Immediate neighbours yitG, yitI
Sequences Protein DNA Advanced_DNA
Genetic context
YitH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YitH expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

S-box

The gene

Basic information

  • Locus tag: BSU10990

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: N-acetyltransferase domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism: S-box: transcription termination/ antitermination, the S-box riboswitch binds S-adenosylmethionine resulting in termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532] [WorldCat.org] [DOI] (I p)