Difference between revisions of "YitG"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitF]]'', ''[[yitH]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yitF]]'', ''[[yitH]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10980 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10980 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yitG_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yitG_context.gif]]

Revision as of 09:53, 14 May 2013

  • Description: similar to multidrug resistance protein

Gene name yitG
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yitG
MW, pI 45 kDa, 9.744
Gene length, protein length 1266 bp, 422 aa
Immediate neighbours yitF, yitH
Sequences Protein DNA DNA_with_flanks
Genetic context
YitG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YitG expression.png















Categories containing this gene/protein

transporters/ other, sporulation proteins, resistance against toxins/ antibiotics

This gene is a member of the following regulons

SigG regulon, Efp-dependent proteins

The gene

Basic information

  • Locus tag: BSU10980

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:
    • translation is likely to require Efp due to the presence of several consecutive proline residues PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325] [WorldCat.org] [DOI] (P p)

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

M S Turner, J D Helmann
Mutations in multidrug efflux homologs, sugar isomerases, and antimicrobial biosynthesis genes differentially elevate activity of the sigma(X) and sigma(W) factors in Bacillus subtilis.
J Bacteriol: 2000, 182(18);5202-10
[PubMed:10960106] [WorldCat.org] [DOI] (P p)