Difference between revisions of "YhfQ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhfP]]'', ''[[yhfR]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhfP]]'', ''[[yhfR]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10330 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10330 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10330 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10330 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10330 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10330 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yhfQ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yhfQ_context.gif]]

Revision as of 09:50, 14 May 2013

Gene name yhfQ
Synonyms
Essential no
Product iron/ citrate ABC transporter (solute-binding protein)
Function iron uptake
Gene expression levels in SubtiExpress: yhfQ
Interactions involving this protein in SubtInteract: YhfQ
MW, pI 38 kDa, 9.303
Gene length, protein length 1044 bp, 348 aa
Immediate neighbours yhfP, yhfR
Sequences Protein DNA DNA_with_flanks
Genetic context
YhfQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhfQ expression.png
























Categories containing this gene/protein

ABC transporters, acquisition of iron, iron metabolism, membrane proteins

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU10330

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • repressed unless the cells enter an iron starvation (Fur) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)

Noel Baichoo, Tao Wang, Rick Ye, John D Helmann
Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon.
Mol Microbiol: 2002, 45(6);1613-29
[PubMed:12354229] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)