Difference between revisions of "YheD"

From SubtiWiki
Jump to: navigation, search
m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
Line 101: Line 101:
 
* '''Operon:''' ''[[yheC]]-[[yheD]]'' {{PubMed|12480901}}
 
* '''Operon:''' ''[[yheC]]-[[yheD]]'' {{PubMed|12480901}}
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12480901}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yheD_1050811_1052172_-1 yheD] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigE]] {{PubMed|15699190,12480901}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:59, 12 April 2012

  • Description: unknown

Gene name yheD
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 51 kDa, 8.737
Gene length, protein length 1359 bp, 453 aa
Immediate neighbours yheE, yheC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YheD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU09770

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: yheC/yheD family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: forespore outer membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christiaan van Ooij, Patrick Eichenberger, Richard Losick
Dynamic patterns of subcellular protein localization during spore coat morphogenesis in Bacillus subtilis.
J Bacteriol: 2004, 186(14);4441-8
[PubMed:15231775] [WorldCat.org] [DOI] (P p)

Ritsuko Kuwana, Yasuhiro Kasahara, Machiko Fujibayashi, Hiromu Takamatsu, Naotake Ogasawara, Kazuhito Watabe
Proteomics characterization of novel spore proteins of Bacillus subtilis.
Microbiology (Reading): 2002, 148(Pt 12);3971-3982
[PubMed:12480901] [WorldCat.org] [DOI] (P p)