Difference between revisions of "YhcO"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 297 bp, 99 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 297 bp, 99 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcN]]'', ''[[yhcP]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcN]]'', ''[[yhcQ]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12744&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12744&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yhcO]]-[[yhcP]]'' {{PubMed|15383836}}
+
* '''Operon:''' ''[[yhcO]]'' {{PubMed|15383836}}
  
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15383836}}, [[SigK]] {{PubMed|15699190,15383836}}
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15383836}}, [[SigK]] {{PubMed|15699190,15383836}}

Revision as of 20:11, 2 September 2009

  • Description: unknown

Gene name yhcO
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 11 kDa, 9.854
Gene length, protein length 297 bp, 99 aa
Immediate neighbours yhcN, yhcQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhcO context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU09165

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)