Difference between revisions of "YhbH"

From SubtiWiki
Jump to: navigation, search
(Extended information on the protein)
Line 88: Line 88:
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
+
* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 19:37, 25 August 2012

  • Description: SigE-dependent sporulation gene

Gene name yhbH
Synonyms yzdC
Essential no
Product unknown
Function sporulation
Gene expression levels in SubtiExpress: yhbH
MW, pI 45 kDa, 6.101
Gene length, protein length 1176 bp, 392 aa
Immediate neighbours prkA, yhbI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhbH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhbH expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU08980

Phenotypes of a mutant

defect in sporulation PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0229 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133] [WorldCat.org] [DOI] (P p)

Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922] [WorldCat.org] [DOI] (P p)

Michiel A Noback, Siger Holsappel, Rense Kiewiet, Peter Terpstra, Rolf Wambutt, Holger Wedler, Gerard Venema, Sierd Bron
The 172 kb prkA-addAB region from 83 degrees to 97 degrees of the Bacillus subtilis chromosome contains several dysfunctional genes, the glyB marker, many genes encoding transporter proteins, and the ubiquitous hit gene.
Microbiology (Reading): 1998, 144 ( Pt 4);859-875
[PubMed:9579061] [WorldCat.org] [DOI] (P p)