Difference between revisions of "YfnA"

From SubtiWiki
Jump to: navigation, search
Line 21: Line 21:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfnB]]'', ''[[yfmT]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfnB]]'', ''[[yfmT]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07340 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07340 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfnA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfnA_context.gif]]

Revision as of 09:41, 14 May 2013

  • Description: similar to metabolite transport protein

Gene name yfnA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yfnA
MW, pI 48 kDa, 9.821
Gene length, protein length 1383 bp, 461 aa
Immediate neighbours yfnB, yfmT
Sequences Protein DNA DNA_with_flanks
Genetic context
YfnA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfnA expression.png
























Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU07340

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: amino acid-polyamine-organocation (APC) superfamily (according to Swiss-Prot)
  • Paralogous protein(s): YhdG

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)