Difference between revisions of "YfmS"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
 
+
* '''Description:''' soluble chemotaxis receptor <br/><br/>
 
 
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-

Revision as of 10:29, 13 August 2012

  • Description: soluble chemotaxis receptor

Gene name yfmS
Synonyms
Essential no
Product soluble chemotaxis receptor
Function control of chemotaxis
Gene expression levels in SubtiExpress: yfmS
MW, pI 30 kDa, 4.527
Gene length, protein length 858 bp, 286 aa
Immediate neighbours yfmT, yfmR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfmS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfmS expression.png
























Categories containing this gene/protein

motility and chemotaxis

This gene is a member of the following regulons

SigD regulon

The gene

Basic information

  • Locus tag: BSU07360

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • in minimal medium, YfmS is present with 4,200 +/- 800 molecules per cell PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Vincent J Cannistraro, George D Glekas, Christopher V Rao, George W Ordal
Cellular stoichiometry of the chemotaxis proteins in Bacillus subtilis.
J Bacteriol: 2011, 193(13);3220-7
[PubMed:21515776] [WorldCat.org] [DOI] (I p)

Masakuni Serizawa, Hiroki Yamamoto, Hirotake Yamaguchi, Yasutaro Fujita, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses.
Gene: 2004, 329;125-36
[PubMed:15033535] [WorldCat.org] [DOI] (P p)

Hiroki Yamamoto, Shigeki Uchiyama, Fajar Aji Nugroho, Junichi Sekiguchi
A 23.4 kb segment at the 69 degrees-70 degrees region of the Bacillus subtilis genome.
Microbiology (Reading): 1997, 143 ( Pt 4);1317-1320
[PubMed:9141694] [WorldCat.org] [DOI] (P p)