Difference between revisions of "YfhK"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhJ]]'', ''[[yfhL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhJ]]'', ''[[yfhL]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yfhK_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12685&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yfhK_protein.txt Protein sequence]'''
 
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfhK_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfhK_context.gif]]

Revision as of 04:06, 17 April 2009

  • Description: general stress protein, similar to cell division inhibitor

Gene name yfhK
Synonyms
Essential no
Product unknown
Function survival of ethonol stress and at low and high temperatures
MW, pI 18 kDa, 9.96
Gene length, protein length 516 bp, 172 aa
Immediate neighbours yfhJ, yfhL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfhK context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation: repressed by casamino acids PubMed , induced by stress (SigB) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Mäder et al. (2002) Transcriptome and Proteome Analysis of Bacillus subtilis Gene Expression Modulated by Amino Acid Availability. J. Bacteriol 184: 1844288-4295 PubMed
  2. Höper et al. (2005) Comprehensive Characterization of the Contribution of Individual SigB-Dependent General Stress Genes to Stress Resistance of Bacillus subtilis. J. Bact. 187: 2810-2826 PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed