Difference between revisions of "YesZ"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' [[yesS]]-[[yesT]]-[[yesU]]-[[yesV]]-[[yesW]]-[[yesX]]-[[yesY]]-[[yesZ]]
 +
{{PubMed|19651770}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  
* '''Regulation:'''  
+
* '''Regulation:''' induced by pectin ([[YesS]]) {{PubMed|19651770}}
 
+
* '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:''' [[YesS]]: transcriptional activation {{PubMed|19651770}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
<pubmed> 17056685 </pubmed>
+
<pubmed> 19651770  17056685 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 09:59, 29 August 2009

  • Description: beta-galactosidase

Gene name yesZ
Synonyms
Essential no
Product beta-galactosidase
Function unknown
MW, pI 73 kDa, 5.5
Gene length, protein length 1989 bp, 663 aa
Immediate neighbours yesY, yetA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YesZ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU07080

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides (according to Swiss-Prot)
  • Protein family: glycosyl hydrolase 42 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

PubMed

  • Regulatory mechanism: YesS: transcriptional activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Sandrine Poncet, Maryline Soret, Peggy Mervelet, Josef Deutscher, Philippe Noirot
Transcriptional activator YesS is stimulated by histidine-phosphorylated HPr of the Bacillus subtilis phosphotransferase system.
J Biol Chem: 2009, 284(41);28188-28197
[PubMed:19651770] [WorldCat.org] [DOI] (I p)

Stephanie Shipkowski, Jean E Brenchley
Bioinformatic, genetic, and biochemical evidence that some glycoside hydrolase family 42 beta-galactosidases are arabinogalactan type I oligomer hydrolases.
Appl Environ Microbiol: 2006, 72(12);7730-8
[PubMed:17056685] [WorldCat.org] [DOI] (P p)