Difference between revisions of "YesT"

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* '''Description:''' rhamnogalacturonan acetylesterase <br/><br/>
 
 
 
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Revision as of 09:03, 13 August 2012

  • Description: rhamnogalacturonan acetylesterase

Gene name yesT
Synonyms
Essential no
Product rhamnogalacturonan esterase
Function pectin utilization
Gene expression levels in SubtiExpress: yesT
MW, pI 25 kDa, 5.505
Gene length, protein length 696 bp, 232 aa
Immediate neighbours yesS, yesU
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YesT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YesT expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

YesS regulon

The gene

Basic information

  • Locus tag: BSU07020

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 'GDSL' lipolytic enzyme family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulatory mechanism: YesS: transcriptional activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Sandrine Poncet, Maryline Soret, Peggy Mervelet, Josef Deutscher, Philippe Noirot
Transcriptional activator YesS is stimulated by histidine-phosphorylated HPr of the Bacillus subtilis phosphotransferase system.
J Biol Chem: 2009, 284(41);28188-28197
[PubMed:19651770] [WorldCat.org] [DOI] (I p)

Irene Martínez-Martínez, José Navarro-Fernández, José Daniel Lozada-Ramírez, Francisco García-Carmona, Alvaro Sánchez-Ferrer
YesT: a new rhamnogalacturonan acetyl esterase from Bacillus subtilis.
Proteins: 2008, 71(1);379-88
[PubMed:17957779] [WorldCat.org] [DOI] (I p)

Akihito Ochiai, Takafumi Itoh, Akiko Kawamata, Wataru Hashimoto, Kousaku Murata
Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization.
Appl Environ Microbiol: 2007, 73(12);3803-13
[PubMed:17449691] [WorldCat.org] [DOI] (P p)