Difference between revisions of "YerA"

From SubtiWiki
Jump to: navigation, search
Line 19: Line 19:
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1740 bp, 580 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1740 bp, 580 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yecA]]'', ''[[yerB]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yezF]]'', ''[[yerB]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12476&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12476&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 13:04, 29 November 2012

  • Description: similar to adenine desaminase

Gene name yerA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yerA
MW, pI 66 kDa, 5.82
Gene length, protein length 1740 bp, 580 aa
Immediate neighbours yezF, yerB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YerA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YerA expression.png
























Categories containing this gene/protein

phosphoproteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU06560

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Adenine + H2O = hypoxanthine + NH3 (according to Swiss-Prot)
  • Protein family: adenine deaminase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation on Ser-399 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Boris Macek, Ivan Mijakovic, Jesper V Olsen, Florian Gnad, Chanchal Kumar, Peter R Jensen, Matthias Mann
The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Mol Cell Proteomics: 2007, 6(4);697-707
[PubMed:17218307] [WorldCat.org] [DOI] (P p)