Difference between revisions of "YdjM"

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* '''Description:''' member of the [[WalR]] regulon <br/><br/>
 
 
 
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Revision as of 10:42, 10 August 2012

  • Description: member of the WalR regulon

Gene name ydjM
Synonyms yzvA
Essential no
Product unknown
Function may be involved in cell wall metabolism (WalR regulon)
Gene expression levels in SubtiExpress: ydjM
MW, pI 13 kDa, 10.57
Gene length, protein length 369 bp, 123 aa
Immediate neighbours bdhA, ydjN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdjM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdjM expression.png
























Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

PhoP regulon, WalR regulon

The gene

Basic information

  • Locus tag: BSU06250

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ydjM (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christian Degering, Thorsten Eggert, Michael Puls, Johannes Bongaerts, Stefan Evers, Karl-Heinz Maurer, Karl-Erich Jaeger
Optimization of protease secretion in Bacillus subtilis and Bacillus licheniformis by screening of homologous and heterologous signal peptides.
Appl Environ Microbiol: 2010, 76(19);6370-6
[PubMed:20709850] [WorldCat.org] [DOI] (I p)

Paola Bisicchia, David Noone, Efthimia Lioliou, Alistair Howell, Sarah Quigley, Thomas Jensen, Hanne Jarmer, Kevin M Devine
The essential YycFG two-component system controls cell wall metabolism in Bacillus subtilis.
Mol Microbiol: 2007, 65(1);180-200
[PubMed:17581128] [WorldCat.org] [DOI] (P p)