Difference between revisions of "YdjA"

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(Extended information on the protein)
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=References=
 
=References=
<pubmed> 11751814 </pubmed>
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<pubmed> 11751814 22092861</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 14:26, 19 November 2011

  • Description: component of the BsuM DNA restriction system

Gene name ydjA
Synonyms
Essential no
Product unknown
Function BsuM DNA restriction
MW, pI 54 kDa, 8.332
Gene length, protein length 1395 bp, 465 aa
Immediate neighbours ydiS, ydjB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdjA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

DNA restriction/ modification

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU06110

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Tomoko Maehara, Mitsuhiro Itaya, Mitsuo Ogura, Teruo Tanaka
Effect of Bacillus subtilis BsuM restriction-modification on plasmid transfer by polyethylene glycol-induced protoplast fusion.
FEMS Microbiol Lett: 2011, 325(1);49-55
[PubMed:22092861] [WorldCat.org] [DOI] (I p)

Hideyuki Ohshima, Satoshi Matsuoka, Kei Asai, Yoshito Sadaie
Molecular organization of intrinsic restriction and modification genes BsuM of Bacillus subtilis Marburg.
J Bacteriol: 2002, 184(2);381-9
[PubMed:11751814] [WorldCat.org] [DOI] (P p)