ydhU/1

ydhU/1
168

similar to Mn catalase, inactive pseudogene in strain 168

locus
BSU_05890
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ydhU/1, ydhU

Genomic Context

Categories containing this gene/protein

This gene is a member of the following regulons

Gene
Coordinates
633,923 → 634,651
Phenotypes of a mutant
thsi is a pseudogene in ''B. subtilis'' 168
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The protein
Protein family
manganese catalase family (according to Swiss-Prot)
Structure
[PDB|2CWL] (pseudokatalase from Thermus thermophilus, 44% identity)
Expression and Regulation
Operons
genes
[gene|BDDD52CE09533CFD6557B933F2AE1C9B94F9708B|ydhU/2]-[gene|F7C5C38298E1F1EF13A11332C92EA624D9381A3E|ydhU/1]
description
[pubmed|22383849]
regulatory mechanism
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
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[gene|BDDD52CE09533CFD6557B933F2AE1C9B94F9708B|ydhU/2]->[gene|F7C5C38298E1F1EF13A11332C92EA624D9381A3E|ydhU/1]

2024-03-21 18:56:53

Bzhu

49

422e9aca8379f80622d7a3a34178cf723bfd7f05

609F6050D8BFE6F2C4F99EC218F6579C28F15CCC

Biological materials
Mutant
MGNA-C196 (ydhU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2194 NBRP B. subtilis, Japan]
BKE05890 (Δ[gene|F7C5C38298E1F1EF13A11332C92EA624D9381A3E|ydhU/1]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05890 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_TCTGAAATTAGAGCTTTGGA,  downstream forward: _UP4_TAATCCAGTGGGAAGGTGCT
BKK05890 (Δ[gene|F7C5C38298E1F1EF13A11332C92EA624D9381A3E|ydhU/1]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05890 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_TCTGAAATTAGAGCTTTGGA,  downstream forward: _UP4_TAATCCAGTGGGAAGGTGCT
References
12354229

F7C5C38298E1F1EF13A11332C92EA624D9381A3E

Page visits: 1498

Time of last update: 2024-03-24 14:51:21

Author of last update: Jstuelk